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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19783540_19784336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19783540 - 19784336

Intron Length:

797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CATTGATTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

CATTCATTGATT

Flanking Amino Acid:

IINGLLQEWKGPRTKDDLRA

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

87.1

Major BPS

74.9

0.62

81.3

29.9

Major PPT

72.8

0.51

0.9

66.3

39.4

Minor 5ss

38.9

-1.3

2.8

43.1

43.9

Minor BPS

63.5

0.5

1.6

77.07

39.6

Associated Gene:

Gene:

HECTD2

Ensembl Gene ID:

ENSAPLG00000010621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039584

19775494 - 19803216

27723

ENSAPLT00000028271

19770812 - 19803216

32405

ENSAPLT00000011065

19770812 - 19803216

32405