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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19783540_19786971_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19783540 - 19786971

Intron Length:

3432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCACAT

U12 Branch Point Sequence:

ATGAGAGTAACT

Flanking Amino Acid:

IINGLLQEWKGISQRRFKQV

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

87.1

Major BPS

68.9

0.47

Major PPT

86.1

0.81

0.7

85.5

29.2

Minor 5ss

38.9

-1.3

2.8

43.1

43.9

Minor BPS

42.2

-0.5

2.5

64.17

45.8

Associated Gene:

Gene:

HECTD2

Ensembl Gene ID:

ENSAPLG00000010621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032346

19770812 - 19803216

32405