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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19788541_19790415_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19788541 - 19790415

Intron Length:

1875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

GAAATTTTATCT

Flanking Amino Acid:

HNWQCYGNSHRFSFCQYPFI

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

79.9

0.67

0.9

77.7

35.8

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

49.6

0.05

1.6

63.21

40.7

Associated Gene:

Gene:

HECTD2

Ensembl Gene ID:

ENSAPLG00000010621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028271

19770812 - 19803216

32405

ENSAPLT00000011065

19770812 - 19803216

32405

ENSAPLT00000039584

19775494 - 19803216

27723

ENSAPLT00000032346

19770812 - 19803216

32405