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Intron Name: Anas_platyrhynchos_platyrhynchos_6_19792692_19794568_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19792692 - 19794568

Intron Length:

1877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

ACCTCTTCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

TGCAACTTACCT

Flanking Amino Acid:

LIRQIFHPDYGMFTYHKDSR

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

81.9

26.2

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

78.7

0.65

0.8

72.2

31.8

Minor 5ss

38.5

-1.3

2.9

45.9

43.7

Minor BPS

51.8

0.14

1.9

70.56

45.7

Associated Gene:

Gene:

HECTD2

Ensembl Gene ID:

ENSAPLG00000010621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032346

19770812 - 19803216

32405

ENSAPLT00000028271

19770812 - 19803216

32405

ENSAPLT00000011065

19770812 - 19803216

32405

ENSAPLT00000039584

19775494 - 19803216

27723