Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_19897436_19898048_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19897436 - 19898048

Intron Length:

613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCATATCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTTTCTTCATA

Flanking Amino Acid:

EGATVLEKKEVSGVDFSINQ

Intron Amino Acid Position:

814

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.6

37.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

78.4

0.64

0.9

70.4

39.4

Minor 5ss

31.2

-2.1

3.5

46.7

48.6

Minor BPS

70.6

0.64

1.7

82.43

32.9

Associated Gene:

Gene:

TNKS2

Ensembl Gene ID:

ENSAPLG00000011056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011614

19883071 - 19904008

20938