Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_19979965_19985101_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19979965 - 19985101

Intron Length:

5137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTATGGAAT

5'SS Class:

major

3'SS Sequence:

TAATGTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATTTTATTAATA

Flanking Amino Acid:

ISALSLLNTGEYEARTGRMC

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.1

71.3

40.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

69.1

0.43

43.6

Minor 5ss

39.6

-1.2

3.2

48.4

47.6

Minor BPS

69.8

0.62

1.5

78.59

31.1

Associated Gene:

Gene:

TBC1D12

Ensembl Gene ID:

ENSAPLG00000012124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034207

19957915 - 19999663

41749