Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_19990037_19990355_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19990037 - 19990355

Intron Length:

319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

ATCCCTATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCTAT

U12 Branch Point Sequence:

GCATCCCTATTC

Flanking Amino Acid:

VNEILPNWEGMRATRRVREL

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

79.7

28.2

Major BPS

56.2

0.15

1.3

54.7

42.5

Major PPT

71.5

0.48

0.9

62.9

37.7

Minor 5ss

34.4

-1.8

3.3

44.6

43.6

Minor BPS

47.8

-0.1

1.9

56.7

41.9

Associated Gene:

Gene:

TBC1D12

Ensembl Gene ID:

ENSAPLG00000012124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034207

19957915 - 19999663

41749

ENSAPLT00000012634

19957915 - 19999663

41749