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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20002714_20004268_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20002714 - 20004268

Intron Length:

1555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TTGTATTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

AGTGACTTAATT

Flanking Amino Acid:

ASFLTRDISSTEPVHIKKRK

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.2

86.9

30.1

Major BPS

78.2

0.7

77.9

32.1

Major PPT

0.79

0.9

77.1

41.6

Minor 5ss

37.6

-1.4

50.6

39.2

Minor BPS

63.1

0.49

1.6

76.25

40.3

Associated Gene:

Gene:

NOC3L

Ensembl Gene ID:

ENSAPLG00000012432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012978

19999737 - 20015261

15525