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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20004619_20005719_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20004619 - 20005719

Intron Length:

1101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATAAAG

5'SS Class:

major

3'SS Sequence:

GACTTCAGTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTAATTC

Flanking Amino Acid:

EDAEETEVAEEPLPVLTPEE

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

64.4

41.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.09

1.2

53.4

40.3

Minor 5ss

32.4

-2

2.9

32.4

41.9

Minor BPS

48.2

-0.1

1.8

60.49

40.3

Associated Gene:

Gene:

NOC3L

Ensembl Gene ID:

ENSAPLG00000012432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012978

19999737 - 20015261

15525