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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20006705_20007368_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20006705 - 20007368

Intron Length:

664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAATAC

5'SS Class:

major

3'SS Sequence:

GTTATGTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTATGTTTACAG

Flanking Amino Acid:

PLTEAEKAAKVKKETQKLRE

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

0.9

70.6

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

79.6

0.67

72.3

42.5

Minor 5ss

32.1

-2

3.1

40.8

45.7

Minor BPS

46.7

-0.3

2.1

56.97

44.6

Associated Gene:

Gene:

NOC3L

Ensembl Gene ID:

ENSAPLG00000012432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012978

19999737 - 20015261

15525