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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20008786_20009141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20008786 - 20009141

Intron Length:

356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTATGTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

GTTTACTTAAAA

Flanking Amino Acid:

RKNLSRMQRKWKKAEEKLER

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

83.5

35.1

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

87.1

0.84

0.8

84.7

35.8

Minor 5ss

46.2

-0.4

2.8

67.2

43.9

Minor BPS

70.2

0.63

1.6

79.09

36.3

Associated Gene:

Gene:

NOC3L

Ensembl Gene ID:

ENSAPLG00000012432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012978

19999737 - 20015261

15525