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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20009617_20010053_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20009617 - 20010053

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGATTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

ATCTCTTTGATT

Flanking Amino Acid:

LLPAVLEGLAKFAHLINVEF

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

75.3

32.6

Major BPS

0.85

0.9

39.9

Major PPT

71.4

0.48

1.1

71.4

37.5

Minor 5ss

34.8

-1.7

3.5

49.1

Minor BPS

72.1

0.78

1.1

80.61

35.6

Associated Gene:

Gene:

NOC3L

Ensembl Gene ID:

ENSAPLG00000012432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012978

19999737 - 20015261

15525