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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20010131_20010211_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20010131 - 20010211

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAGAGCTT

5'SS Class:

major

3'SS Sequence:

CTTAGGACTTAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTGTACTGAATC

Flanking Amino Acid:

VLHSLIASGVTIGTVFIAFS

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.4

0.27

1.1

60.4

44.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

56.9

0.15

1.1

57.5

42.3

Minor 5ss

36.4

-1.5

3.9

55.1

43.8

Minor BPS

56.4

0.18

1.7

65.3

40.1

Associated Gene:

Gene:

NOC3L

Ensembl Gene ID:

ENSAPLG00000012432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012978

19999737 - 20015261

15525