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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20010268_20010405_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20010268 - 20010405

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

ACATCTTTACAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

ACATCTTTACAA

Flanking Amino Acid:

SVLFIYSLVKTLFSLHAGTT

Intron Amino Acid Position:

567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

58.6

0.2

1.1

57.5

41.6

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

51.4

0.04

1.7

59.51

40.4

Associated Gene:

Gene:

NOC3L

Ensembl Gene ID:

ENSAPLG00000012432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012978

19999737 - 20015261

15525