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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20011499_20011731_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20011499 - 20011731

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAG

U12 Branch Point Sequence:

GTATCAGCAACT

Flanking Amino Acid:

ILATNRVLMQTFPKMDLLLD

Intron Amino Acid Position:

635

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

90.7

21.1

Major BPS

54.4

0.11

1.4

63.4

35.6

Major PPT

77.1

0.61

0.9

69.2

41.8

Minor 5ss

47.8

-0.2

2.8

67.5

37.3

Minor BPS

46.6

-0.1

2.4

71.65

44.4

Associated Gene:

Gene:

NOC3L

Ensembl Gene ID:

ENSAPLG00000012432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012978

19999737 - 20015261

15525