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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20011861_20012504_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20011861 - 20012504

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTTAT

U12 Branch Point Sequence:

TATCCCTCACTC

Flanking Amino Acid:

TALWELHLLQRHYHPTVQKF

Intron Amino Acid Position:

678

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

1.1

73.5

37.5

Major BPS

66.5

0.41

1.1

57.2

40.1

Major PPT

89.4

0.89

0.6

87.9

22.1

Minor 5ss

28.4

-2.5

2.9

31.8

42.6

Minor BPS

51.9

0.04

1.8

65.55

Associated Gene:

Gene:

NOC3L

Ensembl Gene ID:

ENSAPLG00000012432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012978

19999737 - 20015261

15525