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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20054732_20055246_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20054732 - 20055246

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGAT

5'SS Class:

strong_major

3'SS Sequence:

AGAATTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GTTTTGTTAATG

Flanking Amino Acid:

LRKQYVSLYQEDGRFEGPTL

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

30.5

Major BPS

84.4

0.85

34.5

Major PPT

68.9

0.43

62.6

43.3

Minor 5ss

31.4

-2.1

3.5

46.6

48.7

Minor BPS

58.2

0.12

2.1

67.31

Associated Gene:

Gene:

PLCE1

Ensembl Gene ID:

ENSAPLG00000013314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046498

20021994 - 20076428

54435

ENSAPLT00000042921

20021994 - 20076428

54435

ENSAPLT00000013882

20021994 - 20097647

75654