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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20061125_20062942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20061125 - 20062942

Intron Length:

1818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGGCA

5'SS Class:

major

3'SS Sequence:

CTTTTTGCAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

NAVMEFLAGLRSRKVLKMWQ

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.1

59.7

39.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.52

0.9

35.3

Minor 5ss

28.5

-2.5

3.6

39.4

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

PLCE1

Ensembl Gene ID:

ENSAPLG00000013314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046498

20021994 - 20076428

54435

ENSAPLT00000042921

20021994 - 20076428

54435

ENSAPLT00000013882

20021994 - 20097647

75654