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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2017949_2018148_R

Intron Information:

Intron Rank:

143214

Intron Class:

major

Intron Phase:

Intron Coordinates:

2017949 - 2018148

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGCCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

CACCCTATAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

74.5

41.9

Major BPS

75.5

0.63

1.1

34.4

Major PPT

82.7

0.74

0.8

76.5

32.3

Minor 5ss

43.1

-0.8

2.9

54.7

43.7

Minor BPS

49.7

0.06

1.6

63.11

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024393

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041583

1996806 - 2025480

28675

ENSAPLT00000028744

2014613 - 2025480

10868