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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20200770_20201281_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20200770 - 20201281

Intron Length:

512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTTAATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTCTTAATT

Flanking Amino Acid:

AFVLPGLIYYKTGFLGPKGK

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.3

26.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.4

0.77

0.8

81.4

34.9

Minor 5ss

-1.4

3.3

49.4

41.3

Minor BPS

90.1

1.34

0.7

99.4

21.6

Associated Gene:

Gene:

SLC35G1

Ensembl Gene ID:

ENSAPLG00000013753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014320

20200010 - 20205452

5443