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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20223674_20224921_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20223674 - 20224921

Intron Length:

1248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGAAAG

5'SS Class:

major

3'SS Sequence:

TTATTTGTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TTATCTTCAATG

Flanking Amino Acid:

IFKGLDSLTNVDLRGNAFNC

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

64.6

41.3

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

81.2

0.7

0.9

77.4

36.7

Minor 5ss

34.8

-1.7

41.4

44.7

Minor BPS

64.5

0.32

1.6

68.4

39.5

Associated Gene:

Gene:

LGI1

Ensembl Gene ID:

ENSAPLG00000013787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040489

20222023 - 20252606

30584

ENSAPLT00000014396

20222023 - 20252606

30584