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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20224994_20228906_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20224994 - 20228906

Intron Length:

3913

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TCTTCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TCTTCTTTTACA

Flanking Amino Acid:

TFRGLKSLIHLSLANNNLQS

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

76.6

33.9

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

91.8

0.94

0.6

87.1

23.5

Minor 5ss

-1.4

2.8

52.2

44.4

Minor BPS

71.5

0.67

1.6

78.96

37.6

Associated Gene:

Gene:

LGI1

Ensembl Gene ID:

ENSAPLG00000013787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040489

20222023 - 20252606

30584

ENSAPLT00000014396

20222023 - 20252606

30584