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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20228979_20229081_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20228979 - 20229081

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGAGTGAA

5'SS Class:

major

3'SS Sequence:

CGACCCATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

ACTGCTTTGACC

Flanking Amino Acid:

AFMGLPHLEYLFIENNSIKS

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

68.4

31.2

Major BPS

74.1

0.6

66.7

39.9

Major PPT

66.5

0.37

57.8

Minor 5ss

29.1

-2.4

3.2

36.8

41.9

Minor BPS

63.6

0.41

1.4

67.26

39.1

Associated Gene:

Gene:

LGI1

Ensembl Gene ID:

ENSAPLG00000013787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040489

20222023 - 20252606

30584

ENSAPLT00000037153

20222023 - 20252606

30584

ENSAPLT00000014396

20222023 - 20252606

30584