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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20229154_20233104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20229154 - 20233104

Intron Length:

3951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGAAAT

5'SS Class:

major

3'SS Sequence:

TTTCTTTACACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

ATTTCTTTACAC

Flanking Amino Acid:

SFLLTPSLQLLLFTSNTFDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

70.1

35.5

Major BPS

0.62

1.4

85.7

34.9

Major PPT

83.6

0.76

0.8

80.2

30.8

Minor 5ss

32.6

-2

3.1

50.4

45.6

Minor BPS

62.9

0.38

1.7

73.83

36.9

Associated Gene:

Gene:

LGI1

Ensembl Gene ID:

ENSAPLG00000013787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037153

20222023 - 20252606

30584

ENSAPLT00000014396

20222023 - 20252606

30584