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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20233177_20233554_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20233177 - 20233554

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGGGCT

5'SS Class:

major

3'SS Sequence:

TTCTTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

ACTTCATTAATA

Flanking Amino Acid:

PRSVPPDVISLSFVRSAFTK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

63.8

39.6

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

91.3

0.93

0.6

84.4

30.6

Minor 5ss

34.8

-1.7

3.7

57.8

46.4

Minor BPS

69.3

0.6

1.5

74.94

36.6

Associated Gene:

Gene:

LGI1

Ensembl Gene ID:

ENSAPLG00000013787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037153

20222023 - 20252606

30584

ENSAPLT00000014396

20222023 - 20252606

30584