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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20234005_20252328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

20234005 - 20252328

Intron Length:

18324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

TTTTTCTTCCTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.7

36.4

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

90.7

0.92

0.6

89.3

19.6

Minor 5ss

29.3

-2.4

3.5

46.3

Minor BPS

45.9

-0.2

3.6

82.74

39.5

Associated Gene:

Gene:

LGI1

Ensembl Gene ID:

ENSAPLG00000013787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037153

20222023 - 20252606

30584

ENSAPLT00000014396

20222023 - 20252606

30584

ENSAPLT00000040489

20222023 - 20252606

30584