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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20259369_20259919_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20259369 - 20259919

Intron Length:

551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACCTGGA

5'SS Class:

major

3'SS Sequence:

ACCTTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATTATTTAATA

Flanking Amino Acid:

WNEDDEADMNWEKRLAKKYY

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.2

56.2

43.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

84.9

0.79

0.8

79.3

Minor 5ss

36.7

-1.5

3.4

46.8

43.8

Minor BPS

71.1

0.66

1.4

77.47

Associated Gene:

Gene:

FRA10AC1

Ensembl Gene ID:

ENSAPLG00000013980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024652

20251953 - 20276249

24297

ENSAPLT00000014586

20251953 - 20276249

24297