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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20276223_20279039_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20276223 - 20279039

Intron Length:

2817

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAAATAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

CTCACTTTACTT

Flanking Amino Acid:

KKEEEEAAKKAENAAGGGGG

Intron Amino Acid Position:

841

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.2

68.4

32.2

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

-1.9

39.1

46.1

Minor BPS

53.3

0.18

1.7

67.54

44.3

Associated Gene:

Gene:

PDE6C

Ensembl Gene ID:

ENSAPLG00000014049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014789

20276152 - 20304910

28759