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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20280246_20280389_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20280246 - 20280389

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGCACT

5'SS Class:

major

3'SS Sequence:

TATTCTGTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

ATGATCTAAATT

Flanking Amino Acid:

ERTVLQQQPIPMMDRNKGDE

Intron Amino Acid Position:

762

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

70.1

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

77.6

0.62

0.9

41.1

Minor 5ss

44.6

-0.6

2.9

65.2

39.8

Minor BPS

54.9

0.23

1.7

70.25

41.3

Associated Gene:

Gene:

PDE6C

Ensembl Gene ID:

ENSAPLG00000014049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014789

20276152 - 20304910

28759