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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20281579_20281862_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20281579 - 20281862

Intron Length:

284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAGGTGGT

5'SS Class:

major

3'SS Sequence:

TACATTTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TTTGCCTTACAT

Flanking Amino Acid:

SIDPTKKEVIMAMMMTGCDL

Intron Amino Acid Position:

715

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

69.1

41.9

Major BPS

80.4

0.76

80.3

31.8

Major PPT

65.9

0.36

1.1

66.4

38.2

Minor 5ss

35.4

-1.7

3.6

52.7

44.8

Minor BPS

65.3

0.56

1.8

85.06

41.4

Associated Gene:

Gene:

PDE6C

Ensembl Gene ID:

ENSAPLG00000014049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014789

20276152 - 20304910

28759