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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20289013_20289391_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20289013 - 20289391

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGACTT

5'SS Class:

major

3'SS Sequence:

TTAATCATAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTAATCATAACA

Flanking Amino Acid:

VVEKFKVPAEVLTRWMYTVR

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.3

68.1

42.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.9

0.43

63.6

41.4

Minor 5ss

39.4

-1.2

3.2

47.1

Minor BPS

62.3

0.38

1.6

74.02

36.9

Associated Gene:

Gene:

PDE6C

Ensembl Gene ID:

ENSAPLG00000014049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014789

20276152 - 20304910

28759