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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20295547_20295815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20295547 - 20295815

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTAAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACCAT

U12 Branch Point Sequence:

TTTGTTGTAAAT

Flanking Amino Acid:

LYNIESRRSQMLLWSANKVF

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

39.3

Major BPS

65.6

0.39

1.3

75.1

39.4

Major PPT

0.36

42.3

Minor 5ss

-2.2

3.2

38.7

46.6

Minor BPS

49.6

0.05

2.2

75.95

41.3

Associated Gene:

Gene:

PDE6C

Ensembl Gene ID:

ENSAPLG00000014049

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014789

20276152 - 20304910

28759