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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20297417_20317016_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

20297417 - 20317016

Intron Length:

19600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAGA

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CATTGCTGATGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.6

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

68.2

0.41

61.9

39.9

Minor 5ss

32.9

-1.9

2.9

41.2

44.6

Minor BPS

41.5

-0.6

2.2

51.97

45.1

Associated Gene:

Gene:

RBP4

Ensembl Gene ID:

ENSAPLG00000015498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030734

20297235 - 20319875

22641