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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20355252_20361178_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20355252 - 20361178

Intron Length:

5927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

AATGCTTTATTT

Flanking Amino Acid:

PDPIVSVIFKDEKKKTKKID

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

86.7

0.82

0.8

80.7

35.9

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

56.1

0.27

1.7

71.01

40.6

Associated Gene:

Gene:

MYOF

Ensembl Gene ID:

ENSAPLG00000015881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030603

20354241 - 20426380

72140

ENSAPLT00000016672

20354241 - 20426380

72140

ENSAPLT00000034286

20354241 - 20426071

71831

ENSAPLT00000032502

20354241 - 20426071

71831