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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20377457_20377995_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20377457 - 20377995

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAGAT

5'SS Class:

strong_major

3'SS Sequence:

TATATTTATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTATTG

Flanking Amino Acid:

ILSNKPQDFQIRVRVIEGRQ

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

31.4

Major BPS

100

1.24

0.5

100

Major PPT

79.9

0.67

0.9

Minor 5ss

32.2

-2

3.5

47.2

48.2

Minor BPS

61.4

0.22

1.9

72.56

40.4

Associated Gene:

Gene:

MYOF

Ensembl Gene ID:

ENSAPLG00000015881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032502

20354241 - 20426071

71831

ENSAPLT00000030603

20354241 - 20426380

72140

ENSAPLT00000016672

20354241 - 20426380

72140

ENSAPLT00000034286

20354241 - 20426071

71831