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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20379756_20381283_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20379756 - 20381283

Intron Length:

1528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCATG

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTGATCTTTATT

Flanking Amino Acid:

RADCLMGEFKIDVGYVYDEP

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.8

38.7

Major BPS

0.72

78.4

31.2

Major PPT

83.2

0.75

0.8

77.9

34.5

Minor 5ss

37.5

-1.4

47.8

47.9

Minor BPS

59.1

0.37

1.7

75.88

Associated Gene:

Gene:

MYOF

Ensembl Gene ID:

ENSAPLG00000015881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032502

20354241 - 20426071

71831

ENSAPLT00000030603

20354241 - 20426380

72140

ENSAPLT00000016672

20354241 - 20426380

72140

ENSAPLT00000034286

20354241 - 20426071

71831