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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20386077_20388227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20386077 - 20388227

Intron Length:

2151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATACTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTCACATAACA

Flanking Amino Acid:

KIASSGGEVEEFSSSGTGAS

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

32.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.9

0.67

0.8

74.6

34.7

Minor 5ss

39.9

-1.1

3.3

57.8

46.8

Minor BPS

57.2

0.22

1.8

72.46

38.3

Associated Gene:

Gene:

MYOF

Ensembl Gene ID:

ENSAPLG00000015881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030603

20354241 - 20426380

72140

ENSAPLT00000016672

20354241 - 20426380

72140

ENSAPLT00000032502

20354241 - 20426071

71831