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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20392364_20392889_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20392364 - 20392889

Intron Length:

526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTAAATTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTCATTTTAAAT

Flanking Amino Acid:

NVILNMVERLQSNLTTLKSG

Intron Amino Acid Position:

666

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.8

83.2

28.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

71.9

0.49

0.9

65.4

40.5

Minor 5ss

36.2

-1.6

2.7

42.6

38.5

Minor BPS

63.9

0.52

1.4

77.18

39.4

Associated Gene:

Gene:

MYOF

Ensembl Gene ID:

ENSAPLG00000015881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030603

20354241 - 20426380

72140

ENSAPLT00000016672

20354241 - 20426380

72140

ENSAPLT00000034286

20354241 - 20426071

71831

ENSAPLT00000032502

20354241 - 20426071

71831