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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20401698_20402925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20401698 - 20402925

Intron Length:

1228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

GTTTCTAGAAAT

Flanking Amino Acid:

SDLNRAVDEHGWEYGITIPP

Intron Amino Acid Position:

990

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

76.8

0.67

0.9

75.9

Major PPT

82.8

0.74

0.8

81.2

36.5

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

52.9

0.17

1.8

76.39

39.4

Associated Gene:

Gene:

MYOF

Ensembl Gene ID:

ENSAPLG00000015881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034286

20354241 - 20426071

71831

ENSAPLT00000032502

20354241 - 20426071

71831

ENSAPLT00000030603

20354241 - 20426380

72140

ENSAPLT00000016672

20354241 - 20426380

72140