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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20404595_20405870_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20404595 - 20405870

Intron Length:

1276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

TTTTTTAATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

NTPLVSCYFDRVYIYHLRCY

Intron Amino Acid Position:

1133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.81

0.8

81.8

33.6

Minor 5ss

-0.5

2.8

65.4

39.4

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

MYOF

Ensembl Gene ID:

ENSAPLG00000015881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030603

20354241 - 20426380

72140

ENSAPLT00000016672

20354241 - 20426380

72140

ENSAPLT00000034286

20354241 - 20426071

71831

ENSAPLT00000032502

20354241 - 20426071

71831