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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20405949_20407270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20405949 - 20407270

Intron Length:

1322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TATAATATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TATTTCCAATCT

Flanking Amino Acid:

LMALDKDSFSDPYAHVSFLH

Intron Amino Acid Position:

1159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

76.6

33.7

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

75.3

0.57

43.5

Minor 5ss

37.7

-1.4

3.1

47.6

48.1

Minor BPS

47.4

-0.1

2.2

73.36

43.4

Associated Gene:

Gene:

MYOF

Ensembl Gene ID:

ENSAPLG00000015881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032502

20354241 - 20426071

71831

ENSAPLT00000030603

20354241 - 20426380

72140

ENSAPLT00000016672

20354241 - 20426380

72140

ENSAPLT00000034286

20354241 - 20426071

71831