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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20416404_20416511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20416404 - 20416511

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTACTTTAAATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CTTACTTTAAAT

Flanking Amino Acid:

QLQPQDNNGLCDPYIKISLG

Intron Amino Acid Position:

1568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

73.3

37.3

Major BPS

84.4

0.85

34.5

Major PPT

0.43

66.8

38.2

Minor 5ss

32.6

-2

3.3

45.3

43.7

Minor BPS

69.6

0.69

1.4

81.86

39.5

Associated Gene:

Gene:

MYOF

Ensembl Gene ID:

ENSAPLG00000015881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030603

20354241 - 20426380

72140

ENSAPLT00000016672

20354241 - 20426380

72140

ENSAPLT00000034286

20354241 - 20426071

71831

ENSAPLT00000032502

20354241 - 20426071

71831