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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20418396_20418573_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20418396 - 20418573

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

ATTCCATTTATT

Flanking Amino Acid:

GGQDYTLEAAEANKVLHQHL

Intron Amino Acid Position:

1705

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.6

34.9

Major BPS

76.3

0.65

67.3

39.3

Major PPT

86.8

0.83

0.8

84.8

35.4

Minor 5ss

38.5

-1.3

2.9

46.1

43.6

Minor BPS

55.2

0.24

1.9

77.37

38.4

Associated Gene:

Gene:

MYOF

Ensembl Gene ID:

ENSAPLG00000015881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030603

20354241 - 20426380

72140

ENSAPLT00000016672

20354241 - 20426380

72140

ENSAPLT00000034286

20354241 - 20426071

71831

ENSAPLT00000032502

20354241 - 20426071

71831