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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20497329_20497532_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20497329 - 20497532

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TCTTCCAAAAAT

Flanking Amino Acid:

QKVRKELQVKGLLCSPNQEK

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

77.4

30.8

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

84.2

0.77

0.7

77.2

31.5

Minor 5ss

37.9

-1.4

3.2

51.5

45.7

Minor BPS

54.2

0.21

2.1

78.17

43.8

Associated Gene:

Gene:

CYP26A1

Ensembl Gene ID:

ENSAPLG00000002859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002903

20496173 - 20499263

3091