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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20502910_20503004_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20502910 - 20503004

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCGCAA

U12 Branch Point Sequence:

AGGTGCCTAACG

Flanking Amino Acid:

RTALQTFELDGYQIPKGWSV

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.9

31.3

Major BPS

60.8

0.27

1.4

71.6

36.4

Major PPT

75.5

0.57

0.8

69.2

31.3

Minor 5ss

37.8

-1.4

3.3

55.2

42.1

Minor BPS

47.7

-0.3

2.2

55.37

45.4

Associated Gene:

Gene:

CYP26C1

Ensembl Gene ID:

ENSAPLG00000021874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037364

20501825 - 20509168

7344