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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20549832_20552755_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20549832 - 20552755

Intron Length:

2924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

GTTTCCTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTGTTTTGATT

Flanking Amino Acid:

STFQVFTHLPNNNNDHAAMS

Intron Amino Acid Position:

659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

78.6

35.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

83.1

0.74

0.8

80.8

31.1

Minor 5ss

41.5

-0.9

3.5

68.1

42.7

Minor BPS

66.4

0.6

1.3

81.5

34.7

Associated Gene:

Gene:

EXOC6

Ensembl Gene ID:

ENSAPLG00000003365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039725

20510835 - 20602314

91480

ENSAPLT00000023078

20510835 - 20579225

68391

ENSAPLT00000021661

20509114 - 20599957

90844

ENSAPLT00000047408

20510835 - 20602314

91480

ENSAPLT00000003512

20510835 - 20602314

91480

ENSAPLT00000041910

20509114 - 20602059

92946