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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20566470_20570066_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20566470 - 20570066

Intron Length:

3597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

CTTGTTTTACCT

Flanking Amino Acid:

YRCLHIYSVLGDGEIFENYY

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

76.2

Major BPS

0.1

59.7

32.6

Major PPT

79.8

0.67

0.8

77.6

31.1

Minor 5ss

45.6

-0.5

2.5

56.4

42.4

Minor BPS

56.6

0.29

1.7

74.22

43.6

Associated Gene:

Gene:

EXOC6

Ensembl Gene ID:

ENSAPLG00000003365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023078

20510835 - 20579225

68391

ENSAPLT00000047408

20510835 - 20602314

91480

ENSAPLT00000021661

20509114 - 20599957

90844

ENSAPLT00000041910

20509114 - 20602059

92946

ENSAPLT00000003512

20510835 - 20602314

91480

ENSAPLT00000039725

20510835 - 20602314

91480

ENSAPLT00000039448

20509114 - 20602059

92946