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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20588_21240_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20588 - 21240

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCAT

5'SS Class:

strong_major

3'SS Sequence:

AATCTGCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GTTTGATGAACT

Flanking Amino Acid:

NIVLQDEGGKIVHKIIDLGY

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.9

38.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

0.56

0.9

70.3

40.4

Minor 5ss

34.5

-1.8

3.3

47.2

Minor BPS

53.2

0.18

2.1

79.31

42.1

Associated Gene:

Gene:

CHUK

Ensembl Gene ID:

ENSAPLG00000011503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039931

12183 - 46227

34045

ENSAPLT00000037450

14485 - 44896

30412

ENSAPLT00000012207

12183 - 45972

33790