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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20721875_20728063_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20721875 - 20728063

Intron Length:

6189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATGCAAA

Flanking Amino Acid:

VLDKLRPENIRVAIVSKSFE

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

75.4

37.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

89.8

0.89

0.7

87.9

29.4

Minor 5ss

-1.1

2.8

46.3

Minor BPS

45.6

-0.3

2.2

64.53

40.9

Associated Gene:

Gene:

IDE

Ensembl Gene ID:

ENSAPLG00000004758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033321

20694729 - 20757310

62582

ENSAPLT00000025747

20694729 - 20793528

98800

ENSAPLT00000021894

20694729 - 20802810

108082

ENSAPLT00000042444

20694729 - 20776497

81769

ENSAPLT00000005016

20694729 - 20757033

62305

ENSAPLT00000035426

20694729 - 20802810

108082