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Intron Name: Anas_platyrhynchos_platyrhynchos_6_20753716_20755705_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20753716 - 20755705

Intron Length:

1990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TGATGTTAAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TGTTCCTAAAAT

Flanking Amino Acid:

VHVLAREMDSCPVVGEFPCQ

Intron Amino Acid Position:

932

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

59.6

0.22

1.1

55.5

43.7

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

69.4

0.69

1.8

86.3

39.3

Associated Gene:

Gene:

IDE

Ensembl Gene ID:

ENSAPLG00000004758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033321

20694729 - 20757310

62582

ENSAPLT00000025747

20694729 - 20793528

98800

ENSAPLT00000021894

20694729 - 20802810

108082

ENSAPLT00000042444

20694729 - 20776497

81769

ENSAPLT00000005016

20694729 - 20757033

62305

ENSAPLT00000035426

20694729 - 20802810

108082